Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm8793-201ENSMUST00000183069 1303 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 AC134254.1-201ENSMUST00000221362 167 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm42471-201ENSMUST00000201457 1865 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm12363-201ENSMUST00000122250 668 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm26875-201ENSMUST00000181006 950 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm40879-201ENSMUST00000220759 612 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm19163-201ENSMUST00000223313 780 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm44775-201ENSMUST00000207266 1456 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm14892-201ENSMUST00000117636 267 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm18201-201ENSMUST00000174735 875 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm45550-201ENSMUST00000209380 946 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 AC129219.2-201ENSMUST00000224324 701 ntBASIC7.22□□□□□ -1.25
Ubr4A2AN08 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm23270-201ENSMUST00000104055 131 ntBASIC7.21□□□□□ -1.25
Ubr4A2AN08 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm13035-201ENSMUST00000117496 342 ntBASIC7.21□□□□□ -1.25
Ubr4A2AN08 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ubr4A2AN08 Gm15544-201ENSMUST00000118776 1531 ntBASIC7.21□□□□□ -1.25
Ubr4A2AN08 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm15957-201ENSMUST00000118893 974 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm13875-201ENSMUST00000120162 282 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Ighv5-7-201ENSMUST00000192302 244 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms