Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-1A0N8R1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm2445-201ENSMUST00000182798 989 ntBASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm20553-201ENSMUST00000204205 844 ntBASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-1A0N8R1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm2810-201ENSMUST00000118681 990 ntBASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-1A0N8R1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms