Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Gm14494-201ENSMUST00000118786 435 ntBASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Rprl2-201ENSMUST00000157150 290 ntBASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc194A0A140LIT1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Gm11779-201ENSMUST00000118541 368 ntBASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc194A0A140LIT1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc194A0A140LIT1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms