Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm8584-201ENSMUST00000171982 758 ntBASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm9824-201ENSMUST00000178707 561 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm27702-201ENSMUST00000184512 56 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm29310-201ENSMUST00000185468 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21825-201ENSMUST00000185728 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm29109-201ENSMUST00000185895 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21896-201ENSMUST00000186520 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21873-201ENSMUST00000186728 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21794-201ENSMUST00000187056 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21880-201ENSMUST00000187275 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21826-201ENSMUST00000187451 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21198-201ENSMUST00000188393 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21749-201ENSMUST00000189343 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21901-201ENSMUST00000189568 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm29424-201ENSMUST00000189716 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm28599-201ENSMUST00000189838 694 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21867-201ENSMUST00000189917 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm29269-201ENSMUST00000190087 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21722-201ENSMUST00000190153 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm28423-201ENSMUST00000190701 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21899-201ENSMUST00000190745 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21910-201ENSMUST00000191163 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21849-201ENSMUST00000191571 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm28678-201ENSMUST00000191593 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm20910-201ENSMUST00000193268 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm21871-201ENSMUST00000194621 696 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm43474-201ENSMUST00000196415 774 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm18049-201ENSMUST00000208909 581 ntBASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms