Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.41□□□□□ -0.1
Speer3W4VSP1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Speer3W4VSP1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm13183-201ENSMUST00000118615 789 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm14913-201ENSMUST00000120011 1093 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm43514-201ENSMUST00000198852 424 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.4□□□□□ -0.1
Speer3W4VSP1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Speer3W4VSP1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Speer3W4VSP1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.4□□□□□ -0.11
Speer3W4VSP1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Speer3W4VSP1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gm14201-201ENSMUST00000117627 289 ntBASIC14.39□□□□□ -0.11
Speer3W4VSP1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Mir8117-201ENSMUST00000184773 107 ntBASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.39□□□□□ -0.11
Speer3W4VSP1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.39□□□□□ -0.11
Speer3W4VSP1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.39□□□□□ -0.11
Speer3W4VSP1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.39□□□□□ -0.11
Speer3W4VSP1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.38□□□□□ -0.11
Speer3W4VSP1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Speer3W4VSP1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms