Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
PdfS4R2K0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.81□□□□□ -0.68
PdfS4R2K0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.81□□□□□ -0.68
PdfS4R2K0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
PdfS4R2K0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
PdfS4R2K0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.79□□□□□ -0.68
PdfS4R2K0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.79□□□□□ -0.68
PdfS4R2K0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.79□□□□□ -0.68
PdfS4R2K0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.79□□□□□ -0.68
PdfS4R2K0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.79□□□□□ -0.68
PdfS4R2K0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms