Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn3Q9Z0G9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gm15653-201ENSMUST00000119247 907 ntBASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gm27533-201ENSMUST00000183800 152 ntBASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn3Q9Z0G9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn3Q9Z0G9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn3Q9Z0G9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms