Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.21□□□□□ -0.13
Rnf4Q9QZS2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf4Q9QZS2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf4Q9QZS2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.21□□□□□ -0.14
Rnf4Q9QZS2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rnf4Q9QZS2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rnf4Q9QZS2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf4Q9QZS2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Gm7787-201ENSMUST00000216858 688 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf4Q9QZS2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms