Protein–RNA interactions for Protein: Q9JKF7

Mrpl39, 39S ribosomal protein L39, mitochondrial, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl39Q9JKF7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Gm11764-201ENSMUST00000120221 623 ntBASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Gm9182-201ENSMUST00000217829 639 ntBASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.16□□□□□ -0.46
Mrpl39Q9JKF7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Gm7222-201ENSMUST00000117512 906 ntBASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl39Q9JKF7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl39Q9JKF7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms