Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14□□□□□ -0.17
Tubb3Q9ERD7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 AC102291.3-201ENSMUST00000226566 405 ntBASIC14□□□□□ -0.17
Tubb3Q9ERD7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubb3Q9ERD7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Mir7023-201ENSMUST00000185093 64 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm20949-201ENSMUST00000206478 952 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Grk6-205ENSMUST00000224653 2976 ntBASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Tubb3Q9ERD7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms