Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Gm14767-201ENSMUST00000121559 586 ntBASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Gm28630-201ENSMUST00000187806 498 ntBASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdc40Q9DC48 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Gm13823-201ENSMUST00000119930 345 ntBASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Mir7684-201ENSMUST00000183858 60 ntBASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Gm27306-201ENSMUST00000183970 107 ntBASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cdc40Q9DC48 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdc40Q9DC48 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Gm44344-201ENSMUST00000200287 129 ntBASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdc40Q9DC48 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms