Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Chaf1bQ9D0N7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.24□□□□□ -0.29
Chaf1bQ9D0N7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chaf1bQ9D0N7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm11452-201ENSMUST00000122376 690 ntBASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms