Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.76□□□□□ -0.53
Ssbp3Q9D032 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssbp3Q9D032 BC001981-202ENSMUST00000191393 1545 ntBASIC11.76□□□□□ -0.53
Ssbp3Q9D032 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gm27437-201ENSMUST00000183429 107 ntBASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gm27838-201ENSMUST00000184829 128 ntBASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.75□□□□□ -0.53
Ssbp3Q9D032 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Gm12882-201ENSMUST00000121696 517 ntBASIC11.74□□□□□ -0.53
Ssbp3Q9D032 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.74□□□□□ -0.53
Ssbp3Q9D032 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssbp3Q9D032 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms