Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Gm9182-201ENSMUST00000217829 639 ntBASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.01□□□□□ -0.33
Trim13Q9CYB0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim13Q9CYB0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13□□□□□ -0.33
Trim13Q9CYB0 Gm7862-201ENSMUST00000121461 292 ntBASIC13□□□□□ -0.33
Trim13Q9CYB0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim13Q9CYB0 Gm2272-201ENSMUST00000194903 582 ntBASIC13□□□□□ -0.33
Trim13Q9CYB0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Gm7461-201ENSMUST00000058918 827 ntBASIC13□□□□□ -0.33
Trim13Q9CYB0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim13Q9CYB0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms