Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf135Q9CWS1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf135Q9CWS1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rnf135Q9CWS1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Gm11543-201ENSMUST00000120758 370 ntBASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf135Q9CWS1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf135Q9CWS1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Rnf135Q9CWS1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Mir449b-201ENSMUST00000104833 80 ntBASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Gm22175-201ENSMUST00000175007 78 ntBASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rnf135Q9CWS1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms