Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn1Q9CWM4 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn1Q9CWM4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn1Q9CWM4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms