Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm8213-201ENSMUST00000118191 441 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm12203-201ENSMUST00000118235 598 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm12209-201ENSMUST00000120089 596 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm26461-201ENSMUST00000175064 290 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Mir3547-201ENSMUST00000175461 88 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm42627-201ENSMUST00000197347 224 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm43118-201ENSMUST00000199149 775 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm10156-201ENSMUST00000122364 462 ntBASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm27682-201ENSMUST00000183930 110 ntBASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm29199-201ENSMUST00000187766 775 ntBASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldnd1Q9CQX5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Gm15808-201ENSMUST00000119046 604 ntBASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Gm43758-201ENSMUST00000199500 367 ntBASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms