Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Gm15372-201ENSMUST00000120729 834 ntBASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Gm27357-201ENSMUST00000183754 135 ntBASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cotl1Q9CQI6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Gm18041-201ENSMUST00000218210 618 ntBASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.12□□□□□ -0.63
Cotl1Q9CQI6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cotl1Q9CQI6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms