Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm11543-201ENSMUST00000120758 370 ntBASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm17271-201ENSMUST00000165535 355 ntBASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nipsnap3bQ9CQE1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Mir3113-201ENSMUST00000175478 76 ntBASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nipsnap3bQ9CQE1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms