Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim11Q99PQ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim11Q99PQ2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim11Q99PQ2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm45453-201ENSMUST00000211758 853 ntBASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim11Q99PQ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm11594-201ENSMUST00000122313 162 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 AA543401-201ENSMUST00000164248 1269 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm44335-201ENSMUST00000196879 141 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm44297-201ENSMUST00000198304 141 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gm44346-201ENSMUST00000198851 141 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim11Q99PQ2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Gm24513-201ENSMUST00000174964 138 ntBASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Gm27631-201ENSMUST00000184163 466 ntBASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trim11Q99PQ2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms