Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Gm13823-201ENSMUST00000119930 345 ntBASIC14.01□□□□□ -0.17
Trim33Q99PP7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Gm18766-201ENSMUST00000189811 808 ntBASIC14.01□□□□□ -0.17
Trim33Q99PP7 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.01□□□□□ -0.17
Trim33Q99PP7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim33Q99PP7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trim33Q99PP7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14□□□□□ -0.17
Trim33Q99PP7 Fgf17-202ENSMUST00000227123 1336 ntBASIC14□□□□□ -0.17
Trim33Q99PP7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim33Q99PP7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14□□□□□ -0.17
Trim33Q99PP7 Gm15693-201ENSMUST00000120470 637 ntBASIC14□□□□□ -0.17
Trim33Q99PP7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14□□□□□ -0.17
Trim33Q99PP7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14□□□□□ -0.17
Trim33Q99PP7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trim33Q99PP7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14□□□□□ -0.17
Trim33Q99PP7 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.99□□□□□ -0.17
Trim33Q99PP7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.99□□□□□ -0.17
Trim33Q99PP7 Gm6415-201ENSMUST00000118488 348 ntBASIC13.99□□□□□ -0.17
Trim33Q99PP7 Gm13616-201ENSMUST00000120600 222 ntBASIC13.99□□□□□ -0.17
Trim33Q99PP7 Gm6222-201ENSMUST00000120787 396 ntBASIC13.99□□□□□ -0.17
Trim33Q99PP7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim33Q99PP7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim33Q99PP7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms