Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm11793-201ENSMUST00000120433 981 ntBASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm13813-201ENSMUST00000120998 787 ntBASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm12566-201ENSMUST00000121479 359 ntBASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm43058-201ENSMUST00000197645 625 ntBASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.54□□□□□ -0.08
Col25a1Q99MQ5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm24990-201ENSMUST00000157406 323 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm22331-201ENSMUST00000158066 136 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm6916-202ENSMUST00000205523 195 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Gm3222-201ENSMUST00000071282 990 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.53□□□□□ -0.08
Col25a1Q99MQ5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col25a1Q99MQ5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms