Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Gm11424-201ENSMUST00000121929 829 ntBASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlr3Q99MB1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.11■□□□□ 0.01
Tlr3Q99MB1 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlr3Q99MB1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tlr3Q99MB1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms