Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.36□□□□□ -0.43
Scrt1Q99M85 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm45098-201ENSMUST00000207179 657 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm45453-201ENSMUST00000211758 853 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.35□□□□□ -0.43
Scrt1Q99M85 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scrt1Q99M85 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm4984-201ENSMUST00000115987 360 ntBASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm15678-201ENSMUST00000117573 960 ntBASIC12.34□□□□□ -0.43
Scrt1Q99M85 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.34□□□□□ -0.43
Scrt1Q99M85 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.34□□□□□ -0.43
Scrt1Q99M85 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms