Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm25911-201ENSMUST00000157621 56 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm29310-201ENSMUST00000185468 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21825-201ENSMUST00000185728 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm29109-201ENSMUST00000185895 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21896-201ENSMUST00000186520 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21873-201ENSMUST00000186728 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21794-201ENSMUST00000187056 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21880-201ENSMUST00000187275 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21826-201ENSMUST00000187451 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21198-201ENSMUST00000188393 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21749-201ENSMUST00000189343 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21901-201ENSMUST00000189568 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm29424-201ENSMUST00000189716 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm28599-201ENSMUST00000189838 694 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21867-201ENSMUST00000189917 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm29269-201ENSMUST00000190087 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21722-201ENSMUST00000190153 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm28423-201ENSMUST00000190701 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21899-201ENSMUST00000190745 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21910-201ENSMUST00000191163 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21849-201ENSMUST00000191571 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm28678-201ENSMUST00000191593 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm20910-201ENSMUST00000193268 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm21871-201ENSMUST00000194621 696 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cstf3Q99LI7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.61□□□□□ -0.23
Cstf3Q99LI7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.61□□□□□ -0.23
Cstf3Q99LI7 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms