Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.2□□□□□ -0.14
Cdk9Q99J95 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.19□□□□□ -0.14
Cdk9Q99J95 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Gm11764-201ENSMUST00000120221 623 ntBASIC14.19□□□□□ -0.14
Cdk9Q99J95 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.19□□□□□ -0.14
Cdk9Q99J95 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdk9Q99J95 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Gm6443-201ENSMUST00000203599 874 ntBASIC14.18□□□□□ -0.14
Cdk9Q99J95 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.18□□□□□ -0.14
Cdk9Q99J95 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdk9Q99J95 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.17□□□□□ -0.14
Cdk9Q99J95 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms