Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Gm28033-201ENSMUST00000184224 96 ntBASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Gm10060-201ENSMUST00000212002 111 ntBASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Thap2-203ENSMUST00000218989 527 ntBASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.56□□□□□ -0.4
Thumpd1Q99J36 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd1Q99J36 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd1Q99J36 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.54□□□□□ -0.4
Thumpd1Q99J36 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd1Q99J36 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms