Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.26■□□□□ 0.19
Smc1bQ920F6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.26■□□□□ 0.19
Smc1bQ920F6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Gm28760-201ENSMUST00000185995 736 ntBASIC16.25■□□□□ 0.19
Smc1bQ920F6 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.25■□□□□ 0.19
Smc1bQ920F6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc1bQ920F6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.24■□□□□ 0.19
Smc1bQ920F6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Gm9002-201ENSMUST00000178437 499 ntBASIC16.24■□□□□ 0.19
Smc1bQ920F6 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.24■□□□□ 0.19
Smc1bQ920F6 Gm10766-202ENSMUST00000194123 606 ntBASIC16.24■□□□□ 0.19
Smc1bQ920F6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Gm9797-201ENSMUST00000052902 613 ntBASIC16.24■□□□□ 0.19
Smc1bQ920F6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.24■□□□□ 0.19
Smc1bQ920F6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc1bQ920F6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Gm6222-201ENSMUST00000120787 396 ntBASIC16.23■□□□□ 0.19
Smc1bQ920F6 Gm21854-201ENSMUST00000179901 471 ntBASIC16.23■□□□□ 0.19
Smc1bQ920F6 Mir6392-201ENSMUST00000184924 108 ntBASIC16.23■□□□□ 0.19
Smc1bQ920F6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.23■□□□□ 0.19
Smc1bQ920F6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms