Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Gm14701-201ENSMUST00000117156 348 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Gm8410-201ENSMUST00000117225 605 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Gm27622-201ENSMUST00000183779 60 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb1Q91Y08 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Gm6916-202ENSMUST00000205523 195 ntBASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Gm18027-201ENSMUST00000218947 619 ntBASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms