Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 H2af-ps-201ENSMUST00000119066 295 ntBASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Gm45612-201ENSMUST00000211320 160 ntBASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb4Q91XZ6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb4Q91XZ6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms