Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Gm44335-201ENSMUST00000196879 141 ntBASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Gm44297-201ENSMUST00000198304 141 ntBASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Gm44346-201ENSMUST00000198851 141 ntBASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb8Q91XZ2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb8Q91XZ2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb8Q91XZ2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb8Q91XZ2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb8Q91XZ2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb8Q91XZ2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb8Q91XZ2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Gm9824-201ENSMUST00000178707 561 ntBASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Gm2213-201ENSMUST00000197485 688 ntBASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb8Q91XZ2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb8Q91XZ2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb8Q91XZ2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms