Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm5566-201ENSMUST00000116118 459 ntBASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm27622-201ENSMUST00000183779 60 ntBASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm18766-201ENSMUST00000189811 808 ntBASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga4Q91XY4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Gm13453-201ENSMUST00000118708 357 ntBASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Gm9719-201ENSMUST00000162765 543 ntBASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Matn2-206ENSMUST00000228570 2798 ntBASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga4Q91XY4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Gm14767-201ENSMUST00000121559 586 ntBASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Gm29541-201ENSMUST00000191351 678 ntBASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhga4Q91XY4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms