Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 AY702102-202ENSMUST00000194651 1173 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.06■□□□□ 0.16
Trex1Q91XB0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Gm29741-201ENSMUST00000192667 421 ntBASIC16.06■□□□□ 0.16
Trex1Q91XB0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.06■□□□□ 0.16
Trex1Q91XB0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trex1Q91XB0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.05■□□□□ 0.16
Trex1Q91XB0 Mir1982-201ENSMUST00000157368 74 ntBASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm7287-201ENSMUST00000205267 602 ntBASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.05■□□□□ 0.16
Trex1Q91XB0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trex1Q91XB0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.04■□□□□ 0.16
Trex1Q91XB0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm27486-201ENSMUST00000184923 80 ntBASIC16.04■□□□□ 0.16
Trex1Q91XB0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.04■□□□□ 0.16
Trex1Q91XB0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.04■□□□□ 0.16
Trex1Q91XB0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trex1Q91XB0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms