Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm8463-201ENSMUST00000208573 613 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm17795-201ENSMUST00000214505 757 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm6091-201ENSMUST00000098307 165 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.9□□□□□ -0.19
Vsx1Q91V10 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.9□□□□□ -0.19
Vsx1Q91V10 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.89□□□□□ -0.19
Vsx1Q91V10 Gm9182-201ENSMUST00000217829 639 ntBASIC13.89□□□□□ -0.19
Vsx1Q91V10 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.89□□□□□ -0.19
Vsx1Q91V10 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.89□□□□□ -0.19
Vsx1Q91V10 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx1Q91V10 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.88□□□□□ -0.19
Vsx1Q91V10 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.88□□□□□ -0.19
Vsx1Q91V10 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vsx1Q91V10 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.87□□□□□ -0.19
Vsx1Q91V10 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx1Q91V10 Gm23931-201ENSMUST00000103842 109 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms