Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm23200-201ENSMUST00000104379 132 ntBASIC16.36■□□□□ 0.21
StrcQ8VIM6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Gm4909-201ENSMUST00000118749 794 ntBASIC16.36■□□□□ 0.21
StrcQ8VIM6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Gm18584-201ENSMUST00000203098 964 ntBASIC16.36■□□□□ 0.21
StrcQ8VIM6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
StrcQ8VIM6 Gm11978-201ENSMUST00000122315 466 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm13570-201ENSMUST00000140763 309 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm14017-201ENSMUST00000121934 386 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.35■□□□□ 0.21
StrcQ8VIM6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
StrcQ8VIM6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
StrcQ8VIM6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
StrcQ8VIM6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.33■□□□□ 0.21
StrcQ8VIM6 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.33■□□□□ 0.21
StrcQ8VIM6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
StrcQ8VIM6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
StrcQ8VIM6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms