Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.95□□□□□ -0.02
TraipQ8VIG6 Gm29741-201ENSMUST00000192667 421 ntBASIC14.95□□□□□ -0.02
TraipQ8VIG6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
TraipQ8VIG6 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.95□□□□□ -0.02
TraipQ8VIG6 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.95□□□□□ -0.02
TraipQ8VIG6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.95□□□□□ -0.02
TraipQ8VIG6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Gm26464-201ENSMUST00000157094 305 ntBASIC14.94□□□□□ -0.02
TraipQ8VIG6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.94□□□□□ -0.02
TraipQ8VIG6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.94□□□□□ -0.02
TraipQ8VIG6 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.94□□□□□ -0.02
TraipQ8VIG6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Mir497b-201ENSMUST00000093601 125 ntBASIC14.94□□□□□ -0.02
TraipQ8VIG6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TraipQ8VIG6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.93□□□□□ -0.02
TraipQ8VIG6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.93□□□□□ -0.02
TraipQ8VIG6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.93□□□□□ -0.02
TraipQ8VIG6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.93□□□□□ -0.02
TraipQ8VIG6 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.93□□□□□ -0.02
TraipQ8VIG6 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.93□□□□□ -0.02
TraipQ8VIG6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TraipQ8VIG6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms