Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm25990-201ENSMUST00000102440 86 ntBASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm9182-201ENSMUST00000217829 639 ntBASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa1Q8VEE4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa1Q8VEE4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa1Q8VEE4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa1Q8VEE4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rpa1Q8VEE4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa1Q8VEE4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Gm11764-201ENSMUST00000120221 623 ntBASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Gm18041-201ENSMUST00000218210 618 ntBASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa1Q8VEE4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Gm4899-201ENSMUST00000178708 719 ntBASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms