Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 BC001981-202ENSMUST00000191393 1545 ntBASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Gm11424-201ENSMUST00000121929 829 ntBASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Gm5745-201ENSMUST00000183748 313 ntBASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Gm6916-202ENSMUST00000205523 195 ntBASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Ndc1Q8VCB1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Gm9522-201ENSMUST00000182394 926 ntBASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Carlr-201ENSMUST00000181515 2574 ntBASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms