Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Gm19817-201ENSMUST00000199764 2132 ntBASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc9Q8VC31 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Gm13722-201ENSMUST00000117964 3066 ntBASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc9Q8VC31 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc9Q8VC31 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms