Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Atp2a1Q8R429 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Mir6392-201ENSMUST00000184924 108 ntBASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Gm45384-201ENSMUST00000210451 277 ntBASIC15.71■□□□□ 0.11
Atp2a1Q8R429 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.71■□□□□ 0.11
Atp2a1Q8R429 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Atp2a1Q8R429 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp2a1Q8R429 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp2a1Q8R429 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Gm18187-201ENSMUST00000196476 984 ntBASIC15.69■□□□□ 0.1
Atp2a1Q8R429 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Atp2a1Q8R429 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp2a1Q8R429 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Atp2a1Q8R429 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp2a1Q8R429 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms