Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 AW822252-206ENSMUST00000208904 237 ntBASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cchcr1Q8K2I2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Gm25287-201ENSMUST00000103846 110 ntBASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Gm22918-201ENSMUST00000103855 110 ntBASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 AA543401-201ENSMUST00000164248 1269 ntBASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cchcr1Q8K2I2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cchcr1Q8K2I2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm13823-201ENSMUST00000119930 345 ntBASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm25911-201ENSMUST00000157621 56 ntBASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm27525-201ENSMUST00000184465 107 ntBASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Cchcr1Q8K2I2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Gm9824-201ENSMUST00000178707 561 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms