Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn1Q8K0T0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Gm15460-201ENSMUST00000118147 391 ntBASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Gm37714-201ENSMUST00000194742 342 ntBASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Gm9063-201ENSMUST00000223299 582 ntBASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.25■□□□□ 0.19
Rtn1Q8K0T0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Gm7775-201ENSMUST00000218871 853 ntBASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn1Q8K0T0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtn1Q8K0T0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms