Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab11fip3Q8CHD8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rab11fip3Q8CHD8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab11fip3Q8CHD8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Gm8584-201ENSMUST00000171982 758 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Gm43433-201ENSMUST00000196573 481 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab11fip3Q8CHD8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms