Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.4■□□□□ 0.38
Smc5Q8CG46 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smc5Q8CG46 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc5Q8CG46 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm13823-201ENSMUST00000119930 345 ntBASIC17.39■□□□□ 0.37
Smc5Q8CG46 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm25925-201ENSMUST00000158314 306 ntBASIC17.39■□□□□ 0.37
Smc5Q8CG46 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm10175-201ENSMUST00000086013 645 ntBASIC17.39■□□□□ 0.37
Smc5Q8CG46 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.39■□□□□ 0.37
Smc5Q8CG46 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smc5Q8CG46 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc5Q8CG46 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.38■□□□□ 0.37
Smc5Q8CG46 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.38■□□□□ 0.37
Smc5Q8CG46 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.38■□□□□ 0.37
Smc5Q8CG46 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.38■□□□□ 0.37
Smc5Q8CG46 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc5Q8CG46 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.38■□□□□ 0.37
Smc5Q8CG46 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Smc5Q8CG46 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.37■□□□□ 0.37
Smc5Q8CG46 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Gm13015-201ENSMUST00000118674 204 ntBASIC17.37■□□□□ 0.37
Smc5Q8CG46 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 AA619741-201ENSMUST00000195095 646 ntBASIC17.37■□□□□ 0.37
Smc5Q8CG46 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.37■□□□□ 0.37
Smc5Q8CG46 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc5Q8CG46 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms