Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Gm14042-201ENSMUST00000120139 833 ntBASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Gm28630-201ENSMUST00000187806 498 ntBASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.64■□□□□ 0.25
Nup88Q8CEC0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gm12151-201ENSMUST00000121374 290 ntBASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Gm38294-201ENSMUST00000192831 381 ntBASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup88Q8CEC0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Mir8102-201ENSMUST00000184148 139 ntBASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gm17837-201ENSMUST00000186435 985 ntBASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup88Q8CEC0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Mir7684-201ENSMUST00000183858 60 ntBASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Gm27989-201ENSMUST00000184721 107 ntBASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nup88Q8CEC0 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms