Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Pabpn1Q8CCS6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpn1Q8CCS6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Gm43352-201ENSMUST00000196419 3065 ntBASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Gm17040-202ENSMUST00000170597 889 ntBASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 AC123665.1-201ENSMUST00000228204 438 ntBASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpn1Q8CCS6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Gm8856-201ENSMUST00000185254 1144 ntBASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Gm29741-201ENSMUST00000192667 421 ntBASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Arhgef33-207ENSMUST00000224966 490 ntBASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpn1Q8CCS6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pabpn1Q8CCS6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pabpn1Q8CCS6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pabpn1Q8CCS6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Gm26185-201ENSMUST00000157692 266 ntBASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Gm38210-201ENSMUST00000191944 809 ntBASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Ntng1-201ENSMUST00000051253 327 ntBASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pabpn1Q8CCS6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Gm12266-201ENSMUST00000120311 962 ntBASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 AC154176.1-201ENSMUST00000225897 220 ntBASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pabpn1Q8CCS6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Gm17889-201ENSMUST00000198410 598 ntBASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms