Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Gm5479-201ENSMUST00000160578 435 ntBASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Gm43474-201ENSMUST00000196415 774 ntBASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Gm43125-201ENSMUST00000201724 730 ntBASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Gm5312-201ENSMUST00000203728 547 ntBASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Gm25925-201ENSMUST00000158314 306 ntBASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trerf1Q8BXJ2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Gm18737-201ENSMUST00000173594 937 ntBASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trerf1Q8BXJ2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trerf1Q8BXJ2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms