Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube3dQ8BX13 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm8410-201ENSMUST00000117225 605 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm8749-201ENSMUST00000117737 331 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm13015-201ENSMUST00000118674 204 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm13464-201ENSMUST00000119418 935 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube3dQ8BX13 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube3dQ8BX13 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube3dQ8BX13 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms