Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Gm37714-201ENSMUST00000194742 342 ntBASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Gm18027-201ENSMUST00000218947 619 ntBASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp43Q8BUM9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Gm38294-201ENSMUST00000192831 381 ntBASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp43Q8BUM9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Gm33320-201ENSMUST00000192232 530 ntBASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms