Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm5745-201ENSMUST00000183748 313 ntBASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm37917-201ENSMUST00000194711 392 ntBASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm8515-201ENSMUST00000194852 576 ntBASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm5186-201ENSMUST00000218781 920 ntBASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm19220-201ENSMUST00000222682 803 ntBASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap1Q8BTW8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm15823-201ENSMUST00000064305 670 ntBASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms